Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 mt-Tv-201ENSMUST00000082389 69 ntBASIC-0.36□□□□□ -2.47
Trim40Q3UWA4 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.37□□□□□ -2.47
Trim40Q3UWA4 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.37□□□□□ -2.47
Trim40Q3UWA4 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.37□□□□□ -2.47
Trim40Q3UWA4 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.37□□□□□ -2.47
Trim40Q3UWA4 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.37□□□□□ -2.47
Trim40Q3UWA4 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.37□□□□□ -2.47
Trim40Q3UWA4 Gm24384-201ENSMUST00000122693 75 ntBASIC-0.39□□□□□ -2.47
Trim40Q3UWA4 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.39□□□□□ -2.47
Trim40Q3UWA4 Mir214-201ENSMUST00000083582 110 ntBASIC-0.39□□□□□ -2.47
Trim40Q3UWA4 Gm25089-201ENSMUST00000102015 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Snora26-201ENSMUST00000175614 121 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm25840-201ENSMUST00000177821 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm24952-201ENSMUST00000177909 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm23682-201ENSMUST00000178146 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm24652-201ENSMUST00000178223 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm22629-201ENSMUST00000178272 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm24021-201ENSMUST00000178435 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm22274-201ENSMUST00000178441 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm22050-201ENSMUST00000178442 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm23688-201ENSMUST00000178502 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm23944-201ENSMUST00000178607 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm26283-201ENSMUST00000178625 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm25452-201ENSMUST00000178776 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm23286-201ENSMUST00000178963 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm22640-201ENSMUST00000179035 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm25984-201ENSMUST00000179129 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm25585-201ENSMUST00000179469 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm26374-201ENSMUST00000179737 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm24040-201ENSMUST00000179786 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm25017-201ENSMUST00000179805 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm23618-201ENSMUST00000179912 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm26284-201ENSMUST00000180107 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm24570-201ENSMUST00000180314 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Gm24654-201ENSMUST00000180315 79 ntBASIC-0.4□□□□□ -2.47
Trim40Q3UWA4 Mir191-201ENSMUST00000196210 74 ntBASIC-0.41□□□□□ -2.48
Trim40Q3UWA4 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.42□□□□□ -2.48
Trim40Q3UWA4 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.42□□□□□ -2.48
Trim40Q3UWA4 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.42□□□□□ -2.48
Trim40Q3UWA4 Gm27686-201ENSMUST00000185123 91 ntBASIC-0.42□□□□□ -2.48
Trim40Q3UWA4 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.43□□□□□ -2.48
Trim40Q3UWA4 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Trim40Q3UWA4 Gm24705-201ENSMUST00000082808 107 ntBASIC-0.43□□□□□ -2.48
Trim40Q3UWA4 Gm23261-201ENSMUST00000158316 136 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 Mir5619-201ENSMUST00000176065 61 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 Gm44308-201ENSMUST00000197080 99 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 mt-Tf-201ENSMUST00000082387 68 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.44□□□□□ -2.48
Trim40Q3UWA4 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.45□□□□□ -2.48
Trim40Q3UWA4 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.45□□□□□ -2.48
Trim40Q3UWA4 Gm22770-201ENSMUST00000158368 67 ntBASIC-0.45□□□□□ -2.48
Trim40Q3UWA4 Gm20108-201ENSMUST00000219977 153 ntBASIC-0.45□□□□□ -2.48
Trim40Q3UWA4 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.45□□□□□ -2.48
Trim40Q3UWA4 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
Trim40Q3UWA4 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.47□□□□□ -2.48
Trim40Q3UWA4 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.47□□□□□ -2.48
Trim40Q3UWA4 Gm25428-201ENSMUST00000157608 114 ntBASIC-0.47□□□□□ -2.48
Trim40Q3UWA4 Gm24605-201ENSMUST00000104772 96 ntBASIC-0.48□□□□□ -2.49
Trim40Q3UWA4 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-0.48□□□□□ -2.49
Trim40Q3UWA4 Mir5117-201ENSMUST00000083226 84 ntBASIC-0.48□□□□□ -2.49
Trim40Q3UWA4 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.49□□□□□ -2.49
Trim40Q3UWA4 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.49□□□□□ -2.49
Trim40Q3UWA4 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.5□□□□□ -2.49
Trim40Q3UWA4 Gm24099-201ENSMUST00000083384 107 ntBASIC-0.5□□□□□ -2.49
Trim40Q3UWA4 Gm24492-201ENSMUST00000083798 107 ntBASIC-0.5□□□□□ -2.49
Trim40Q3UWA4 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.51□□□□□ -2.49
Trim40Q3UWA4 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.51□□□□□ -2.49
Trim40Q3UWA4 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.52□□□□□ -2.49
Trim40Q3UWA4 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.52□□□□□ -2.49
Trim40Q3UWA4 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.52□□□□□ -2.49
Trim40Q3UWA4 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.52□□□□□ -2.49
Trim40Q3UWA4 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.53□□□□□ -2.49
Trim40Q3UWA4 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.53□□□□□ -2.49
Trim40Q3UWA4 Gm25449-201ENSMUST00000179389 79 ntBASIC-0.53□□□□□ -2.49
Trim40Q3UWA4 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.53□□□□□ -2.49
Trim40Q3UWA4 Gm26253-201ENSMUST00000122493 103 ntBASIC-0.54□□□□□ -2.5
Trim40Q3UWA4 Gm22205-201ENSMUST00000122655 71 ntBASIC-0.54□□□□□ -2.5
Trim40Q3UWA4 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.54□□□□□ -2.5
Trim40Q3UWA4 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.54□□□□□ -2.5
Trim40Q3UWA4 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm25229-201ENSMUST00000178587 79 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Snora62-201ENSMUST00000082991 149 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.55□□□□□ -2.5
Trim40Q3UWA4 Gm22004-201ENSMUST00000101884 107 ntBASIC-0.56□□□□□ -2.5
Trim40Q3UWA4 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.56□□□□□ -2.5
Trim40Q3UWA4 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.56□□□□□ -2.5
Trim40Q3UWA4 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
Trim40Q3UWA4 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.57□□□□□ -2.5
Trim40Q3UWA4 Gm26425-201ENSMUST00000122529 82 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 143.5 ms