Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22039-201ENSMUST00000157278 132 ntBASIC1.17□□□□□ -2.22
Col8a1Q00780 Gm25768-201ENSMUST00000158570 98 ntBASIC1.17□□□□□ -2.22
Col8a1Q00780 Mir6342-201ENSMUST00000183870 125 ntBASIC1.17□□□□□ -2.22
Col8a1Q00780 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.17□□□□□ -2.22
Col8a1Q00780 Gm25161-201ENSMUST00000158913 132 ntBASIC1.16□□□□□ -2.22
Col8a1Q00780 Mir7063-201ENSMUST00000184158 91 ntBASIC1.16□□□□□ -2.22
Col8a1Q00780 Mir10b-201ENSMUST00000083566 68 ntBASIC1.16□□□□□ -2.22
Col8a1Q00780 Gm25968-201ENSMUST00000157167 100 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Gm24942-201ENSMUST00000158328 114 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Gm25641-201ENSMUST00000175135 108 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Gm27977-201ENSMUST00000185159 111 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Gm38323-201ENSMUST00000192450 210 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Gm26224-201ENSMUST00000082506 80 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Gm22652-201ENSMUST00000083207 131 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Mir500-201ENSMUST00000093600 92 ntBASIC1.15□□□□□ -2.23
Col8a1Q00780 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm6272-201ENSMUST00000121256 171 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm23672-201ENSMUST00000157471 107 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm23221-201ENSMUST00000158118 93 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm23072-201ENSMUST00000158243 123 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm25936-201ENSMUST00000179952 114 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm26139-201ENSMUST00000180098 107 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm27717-201ENSMUST00000183933 151 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.14□□□□□ -2.23
Col8a1Q00780 Mir1949-202ENSMUST00000199259 70 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm24201-201ENSMUST00000082946 125 ntBASIC1.14□□□□□ -2.23
Col8a1Q00780 Gm24271-201ENSMUST00000102327 111 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Mir653-201ENSMUST00000102402 85 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm23012-201ENSMUST00000104149 83 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm23708-201ENSMUST00000104367 123 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm13065-201ENSMUST00000119178 141 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm22559-201ENSMUST00000157329 134 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm22663-201ENSMUST00000158721 102 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm27937-201ENSMUST00000183605 88 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm25652-201ENSMUST00000083780 103 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Gm25186-201ENSMUST00000083909 108 ntBASIC1.13□□□□□ -2.23
Col8a1Q00780 Mir669h-201ENSMUST00000116944 125 ntBASIC1.12□□□□□ -2.23
Col8a1Q00780 Gm25648-201ENSMUST00000177844 79 ntBASIC1.12□□□□□ -2.23
Col8a1Q00780 Gm44483-201ENSMUST00000197203 97 ntBASIC1.12□□□□□ -2.23
Col8a1Q00780 Snord95-201ENSMUST00000082846 68 ntBASIC1.12□□□□□ -2.23
Col8a1Q00780 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Col8a1Q00780 Gm25506-201ENSMUST00000104339 70 ntBASIC1.11□□□□□ -2.23
Col8a1Q00780 Gm22087-201ENSMUST00000158339 88 ntBASIC1.11□□□□□ -2.23
Col8a1Q00780 Gm24252-201ENSMUST00000083700 132 ntBASIC1.11□□□□□ -2.23
Col8a1Q00780 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Col8a1Q00780 Gm24233-201ENSMUST00000104317 122 ntBASIC1.1□□□□□ -2.23
Col8a1Q00780 Gm24808-201ENSMUST00000157993 118 ntBASIC1.1□□□□□ -2.23
Col8a1Q00780 Gm24725-201ENSMUST00000158229 125 ntBASIC1.1□□□□□ -2.23
Col8a1Q00780 Mir487b-201ENSMUST00000102265 82 ntBASIC1.09□□□□□ -2.23
Col8a1Q00780 Mir7673-201ENSMUST00000184567 64 ntBASIC1.09□□□□□ -2.23
Col8a1Q00780 Gm42677-201ENSMUST00000196363 127 ntBASIC1.09□□□□□ -2.23
Col8a1Q00780 Gm26438-201ENSMUST00000082593 107 ntBASIC1.09□□□□□ -2.23
Col8a1Q00780 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.09□□□□□ -2.23
Col8a1Q00780 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Col8a1Q00780 Gm23989-201ENSMUST00000117030 66 ntBASIC1.08□□□□□ -2.24
Col8a1Q00780 Gm23783-201ENSMUST00000157941 102 ntBASIC1.08□□□□□ -2.24
Col8a1Q00780 Gm24500-201ENSMUST00000158447 124 ntBASIC1.08□□□□□ -2.24
Col8a1Q00780 Gm27711-201ENSMUST00000183802 118 ntBASIC1.08□□□□□ -2.24
Col8a1Q00780 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.08□□□□□ -2.24
Col8a1Q00780 Gm22459-201ENSMUST00000082577 108 ntBASIC1.08□□□□□ -2.24
Col8a1Q00780 Gm25465-201ENSMUST00000157716 105 ntBASIC1.07□□□□□ -2.24
Col8a1Q00780 Traj60-201ENSMUST00000167781 54 ntBASIC1.07□□□□□ -2.24
Col8a1Q00780 Mir7079-201ENSMUST00000184697 69 ntBASIC1.07□□□□□ -2.24
Col8a1Q00780 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.07□□□□□ -2.24
Col8a1Q00780 Gm23853-201ENSMUST00000158375 104 ntBASIC1.06□□□□□ -2.24
Col8a1Q00780 Gm25656-201ENSMUST00000158466 66 ntBASIC1.06□□□□□ -2.24
Col8a1Q00780 Mir3079-201ENSMUST00000175428 90 ntBASIC1.06□□□□□ -2.24
Col8a1Q00780 Gm16399-201ENSMUST00000181423 219 ntBASIC1.06□□□□□ -2.24
Col8a1Q00780 AC238676.2-201ENSMUST00000220910 94 ntBASIC1.06□□□□□ -2.24
Col8a1Q00780 Mir211-201ENSMUST00000083651 106 ntBASIC1.06□□□□□ -2.24
Col8a1Q00780 Gm24445-201ENSMUST00000083981 107 ntBASIC1.06□□□□□ -2.24
Col8a1Q00780 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col8a1Q00780 Gm25495-201ENSMUST00000104431 131 ntBASIC1.05□□□□□ -2.24
Col8a1Q00780 Gm22520-201ENSMUST00000158269 129 ntBASIC1.05□□□□□ -2.24
Col8a1Q00780 Mir219b-201ENSMUST00000198317 65 ntBASIC1.05□□□□□ -2.24
Col8a1Q00780 Gm25524-201ENSMUST00000101821 107 ntBASIC1.04□□□□□ -2.24
Col8a1Q00780 Gm14533-201ENSMUST00000117088 93 ntBASIC1.04□□□□□ -2.24
Col8a1Q00780 Gm22717-201ENSMUST00000122703 171 ntBASIC1.04□□□□□ -2.24
Col8a1Q00780 Gm25440-201ENSMUST00000158279 154 ntBASIC1.04□□□□□ -2.24
Col8a1Q00780 Gm23730-201ENSMUST00000083236 107 ntBASIC1.04□□□□□ -2.24
Col8a1Q00780 Gm24612-201ENSMUST00000083267 107 ntBASIC1.04□□□□□ -2.24
Col8a1Q00780 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.04□□□□□ -2.24
Col8a1Q00780 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
Col8a1Q00780 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Col8a1Q00780 Gm24865-201ENSMUST00000103246 96 ntBASIC1.03□□□□□ -2.24
Col8a1Q00780 Gm25055-201ENSMUST00000157369 76 ntBASIC1.03□□□□□ -2.24
Col8a1Q00780 Gm29344-201ENSMUST00000068143 210 ntBASIC1.03□□□□□ -2.24
Col8a1Q00780 Mir3071-201ENSMUST00000093621 80 ntBASIC1.03□□□□□ -2.24
Col8a1Q00780 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Col8a1Q00780 Gm22233-201ENSMUST00000157464 114 ntBASIC1.02□□□□□ -2.25
Col8a1Q00780 Gm25868-201ENSMUST00000158253 114 ntBASIC1.02□□□□□ -2.25
Col8a1Q00780 Gm25166-201ENSMUST00000158909 111 ntBASIC1.02□□□□□ -2.25
Col8a1Q00780 Gm23416-201ENSMUST00000175520 95 ntBASIC1.01□□□□□ -2.25
Col8a1Q00780 Gm24070-201ENSMUST00000104519 130 ntBASIC1□□□□□ -2.25
Col8a1Q00780 n-R5s157-201ENSMUST00000122543 121 ntBASIC1□□□□□ -2.25
Col8a1Q00780 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1□□□□□ -2.25
Col8a1Q00780 Mir7010-201ENSMUST00000183464 63 ntBASIC1□□□□□ -2.25
Col8a1Q00780 Gm42533-201ENSMUST00000196247 157 ntBASIC1□□□□□ -2.25
Col8a1Q00780 Gm44211-201ENSMUST00000204867 145 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms