Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm23988-201ENSMUST00000117034 122 ntBASIC-1.16□□□□□ -2.6
Hmgb1P63158 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.16□□□□□ -2.6
Hmgb1P63158 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.16□□□□□ -2.6
Hmgb1P63158 Gm25071-201ENSMUST00000175232 70 ntBASIC-1.17□□□□□ -2.6
Hmgb1P63158 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.17□□□□□ -2.6
Hmgb1P63158 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.17□□□□□ -2.6
Hmgb1P63158 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.18□□□□□ -2.6
Hmgb1P63158 Gm26207-201ENSMUST00000082909 104 ntBASIC-1.18□□□□□ -2.6
Hmgb1P63158 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.19□□□□□ -2.6
Hmgb1P63158 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.2□□□□□ -2.6
Hmgb1P63158 Gm26412-201ENSMUST00000157666 55 ntBASIC-1.21□□□□□ -2.6
Hmgb1P63158 Mir6481-201ENSMUST00000184617 110 ntBASIC-1.21□□□□□ -2.6
Hmgb1P63158 Gm24064-201ENSMUST00000157486 106 ntBASIC-1.22□□□□□ -2.6
Hmgb1P63158 Gm22384-201ENSMUST00000158187 104 ntBASIC-1.24□□□□□ -2.61
Hmgb1P63158 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.25□□□□□ -2.61
Hmgb1P63158 Gm26421-201ENSMUST00000104279 132 ntBASIC-1.26□□□□□ -2.61
Hmgb1P63158 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.26□□□□□ -2.61
Hmgb1P63158 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.26□□□□□ -2.61
Hmgb1P63158 Gm6293-201ENSMUST00000050339 195 ntBASIC-1.26□□□□□ -2.61
Hmgb1P63158 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.27□□□□□ -2.61
Hmgb1P63158 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.27□□□□□ -2.61
Hmgb1P63158 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-1.29□□□□□ -2.62
Hmgb1P63158 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.29□□□□□ -2.62
Hmgb1P63158 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.29□□□□□ -2.62
Hmgb1P63158 Mir7-1-201ENSMUST00000083500 108 ntBASIC-1.29□□□□□ -2.62
Hmgb1P63158 Gm26109-201ENSMUST00000083970 70 ntBASIC-1.29□□□□□ -2.62
Hmgb1P63158 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.3□□□□□ -2.62
Hmgb1P63158 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.3□□□□□ -2.62
Hmgb1P63158 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.31□□□□□ -2.62
Hmgb1P63158 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.31□□□□□ -2.62
Hmgb1P63158 AC140930.2-201ENSMUST00000221803 109 ntBASIC-1.32□□□□□ -2.62
Hmgb1P63158 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.33□□□□□ -2.62
Hmgb1P63158 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.34□□□□□ -2.62
Hmgb1P63158 Gm24001-201ENSMUST00000158463 85 ntBASIC-1.34□□□□□ -2.62
Hmgb1P63158 Gm22911-201ENSMUST00000177920 107 ntBASIC-1.34□□□□□ -2.62
Hmgb1P63158 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.35□□□□□ -2.63
Hmgb1P63158 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.35□□□□□ -2.63
Hmgb1P63158 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.35□□□□□ -2.63
Hmgb1P63158 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.36□□□□□ -2.63
Hmgb1P63158 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.37□□□□□ -2.63
Hmgb1P63158 Mir369-201ENSMUST00000083627 79 ntBASIC-1.37□□□□□ -2.63
Hmgb1P63158 Gm22297-201ENSMUST00000083312 106 ntBASIC-1.38□□□□□ -2.63
Hmgb1P63158 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.39□□□□□ -2.63
Hmgb1P63158 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.39□□□□□ -2.63
Hmgb1P63158 Gm24683-201ENSMUST00000104840 88 ntBASIC-1.39□□□□□ -2.63
Hmgb1P63158 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.39□□□□□ -2.63
Hmgb1P63158 Mir677-202ENSMUST00000197076 78 ntBASIC-1.4□□□□□ -2.63
Hmgb1P63158 Mir574-201ENSMUST00000103854 78 ntBASIC-1.42□□□□□ -2.64
Hmgb1P63158 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.42□□□□□ -2.64
Hmgb1P63158 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.42□□□□□ -2.64
Hmgb1P63158 Gm10813-201ENSMUST00000099936 90 ntBASIC-1.43□□□□□ -2.64
Hmgb1P63158 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.44□□□□□ -2.64
Hmgb1P63158 Gm24384-201ENSMUST00000122693 75 ntBASIC-1.44□□□□□ -2.64
Hmgb1P63158 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.45□□□□□ -2.64
Hmgb1P63158 Gm22140-201ENSMUST00000158745 120 ntBASIC-1.45□□□□□ -2.64
Hmgb1P63158 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.46□□□□□ -2.64
Hmgb1P63158 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.46□□□□□ -2.64
Hmgb1P63158 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.46□□□□□ -2.64
Hmgb1P63158 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.47□□□□□ -2.64
Hmgb1P63158 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.47□□□□□ -2.64
Hmgb1P63158 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.47□□□□□ -2.64
Hmgb1P63158 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.47□□□□□ -2.64
Hmgb1P63158 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.47□□□□□ -2.64
Hmgb1P63158 Gm22055-201ENSMUST00000083388 107 ntBASIC-1.49□□□□□ -2.65
Hmgb1P63158 Gm25991-201ENSMUST00000102439 99 ntBASIC-1.5□□□□□ -2.65
Hmgb1P63158 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.5□□□□□ -2.65
Hmgb1P63158 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.5□□□□□ -2.65
Hmgb1P63158 Mir23a-201ENSMUST00000083677 75 ntBASIC-1.5□□□□□ -2.65
Hmgb1P63158 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.51□□□□□ -2.65
Hmgb1P63158 Gm24916-201ENSMUST00000157287 79 ntBASIC-1.51□□□□□ -2.65
Hmgb1P63158 Gm24971-201ENSMUST00000175581 110 ntBASIC-1.51□□□□□ -2.65
Hmgb1P63158 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.51□□□□□ -2.65
Hmgb1P63158 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.51□□□□□ -2.65
Hmgb1P63158 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.52□□□□□ -2.65
Hmgb1P63158 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.54□□□□□ -2.66
Hmgb1P63158 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
Hmgb1P63158 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.55□□□□□ -2.66
Hmgb1P63158 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.55□□□□□ -2.66
Hmgb1P63158 Gm24801-201ENSMUST00000178503 105 ntBASIC-1.56□□□□□ -2.66
Hmgb1P63158 Gm27686-201ENSMUST00000185123 91 ntBASIC-1.56□□□□□ -2.66
Hmgb1P63158 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.56□□□□□ -2.66
Hmgb1P63158 Gm24918-201ENSMUST00000083022 130 ntBASIC-1.57□□□□□ -2.66
Hmgb1P63158 Gm23494-201ENSMUST00000116830 126 ntBASIC-1.58□□□□□ -2.66
Hmgb1P63158 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.58□□□□□ -2.66
Hmgb1P63158 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.59□□□□□ -2.66
Hmgb1P63158 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.59□□□□□ -2.66
Hmgb1P63158 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
Hmgb1P63158 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-1.61□□□□□ -2.67
Hmgb1P63158 Gm25646-201ENSMUST00000178527 79 ntBASIC-1.61□□□□□ -2.67
Hmgb1P63158 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.61□□□□□ -2.67
Hmgb1P63158 Gm22672-201ENSMUST00000104414 134 ntBASIC-1.62□□□□□ -2.67
Hmgb1P63158 Mir7673-201ENSMUST00000184567 64 ntBASIC-1.62□□□□□ -2.67
Hmgb1P63158 Gm25010-201ENSMUST00000158403 65 ntBASIC-1.63□□□□□ -2.67
Hmgb1P63158 Gm25678-201ENSMUST00000174984 73 ntBASIC-1.63□□□□□ -2.67
Hmgb1P63158 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.63□□□□□ -2.67
Hmgb1P63158 Gm27977-201ENSMUST00000185159 111 ntBASIC-1.63□□□□□ -2.67
Hmgb1P63158 Gm24926-201ENSMUST00000178053 79 ntBASIC-1.64□□□□□ -2.67
Hmgb1P63158 Gm22632-201ENSMUST00000178266 79 ntBASIC-1.64□□□□□ -2.67
Hmgb1P63158 AC166341.8-201ENSMUST00000221267 108 ntBASIC-1.64□□□□□ -2.67
Hmgb1P63158 Gm20108-201ENSMUST00000219977 153 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms