Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Msx1P13297 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Msx1P13297 Gm25055-201ENSMUST00000157369 76 ntBASIC1.58□□□□□ -2.16
Msx1P13297 Gm24288-201ENSMUST00000157630 144 ntBASIC1.58□□□□□ -2.16
Msx1P13297 Gm22520-201ENSMUST00000158269 129 ntBASIC1.58□□□□□ -2.16
Msx1P13297 Gm24222-201ENSMUST00000158834 93 ntBASIC1.58□□□□□ -2.16
Msx1P13297 Gm16399-201ENSMUST00000181423 219 ntBASIC1.58□□□□□ -2.16
Msx1P13297 Gm27894-201ENSMUST00000184177 92 ntBASIC1.58□□□□□ -2.16
Msx1P13297 Gm24070-201ENSMUST00000104519 130 ntBASIC1.57□□□□□ -2.16
Msx1P13297 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Msx1P13297 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.57□□□□□ -2.16
Msx1P13297 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Msx1P13297 Gm23590-201ENSMUST00000157661 104 ntBASIC1.56□□□□□ -2.16
Msx1P13297 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.56□□□□□ -2.16
Msx1P13297 Gm26491-201ENSMUST00000179268 121 ntBASIC1.55□□□□□ -2.16
Msx1P13297 Mir6240-201ENSMUST00000184281 117 ntBASIC1.55□□□□□ -2.16
Msx1P13297 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
Msx1P13297 Gm25274-201ENSMUST00000104296 135 ntBASIC1.54□□□□□ -2.16
Msx1P13297 Gm22233-201ENSMUST00000157464 114 ntBASIC1.54□□□□□ -2.16
Msx1P13297 Gm24400-201ENSMUST00000157865 107 ntBASIC1.54□□□□□ -2.16
Msx1P13297 Gm25868-201ENSMUST00000158253 114 ntBASIC1.54□□□□□ -2.16
Msx1P13297 Gm23416-201ENSMUST00000175520 95 ntBASIC1.54□□□□□ -2.16
Msx1P13297 Gm12432-201ENSMUST00000119540 186 ntBASIC1.53□□□□□ -2.16
Msx1P13297 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.53□□□□□ -2.16
Msx1P13297 Mir6962-201ENSMUST00000199512 63 ntBASIC1.53□□□□□ -2.16
Msx1P13297 Gm44211-201ENSMUST00000204867 145 ntBASIC1.53□□□□□ -2.16
Msx1P13297 Gm26375-201ENSMUST00000101829 106 ntBASIC1.52□□□□□ -2.17
Msx1P13297 Gm25170-201ENSMUST00000104191 129 ntBASIC1.52□□□□□ -2.17
Msx1P13297 Gm15115-201ENSMUST00000121145 264 ntBASIC1.52□□□□□ -2.17
Msx1P13297 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.52□□□□□ -2.17
Msx1P13297 Gm22386-201ENSMUST00000158192 129 ntBASIC1.52□□□□□ -2.17
Msx1P13297 Gm25715-201ENSMUST00000158627 125 ntBASIC1.52□□□□□ -2.17
Msx1P13297 Mir7010-201ENSMUST00000183464 63 ntBASIC1.52□□□□□ -2.17
Msx1P13297 Gm22595-201ENSMUST00000104250 130 ntBASIC1.51□□□□□ -2.17
Msx1P13297 Gm22603-201ENSMUST00000157603 96 ntBASIC1.51□□□□□ -2.17
Msx1P13297 Gm24996-201ENSMUST00000158390 99 ntBASIC1.51□□□□□ -2.17
Msx1P13297 Gm23410-201ENSMUST00000179967 107 ntBASIC1.51□□□□□ -2.17
Msx1P13297 Gm22505-201ENSMUST00000082956 108 ntBASIC1.51□□□□□ -2.17
Msx1P13297 Gm22363-201ENSMUST00000083100 108 ntBASIC1.51□□□□□ -2.17
Msx1P13297 Gm23814-201ENSMUST00000083230 102 ntBASIC1.51□□□□□ -2.17
Msx1P13297 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Msx1P13297 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Msx1P13297 Gm23036-201ENSMUST00000157885 99 ntBASIC1.5□□□□□ -2.17
Msx1P13297 Gm27980-201ENSMUST00000184094 169 ntBASIC1.5□□□□□ -2.17
Msx1P13297 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.5□□□□□ -2.17
Msx1P13297 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Msx1P13297 Gm25309-201ENSMUST00000116728 126 ntBASIC1.49□□□□□ -2.17
Msx1P13297 Gm26181-201ENSMUST00000157687 106 ntBASIC1.49□□□□□ -2.17
Msx1P13297 Gm42533-201ENSMUST00000196247 157 ntBASIC1.49□□□□□ -2.17
Msx1P13297 Mir7231-201ENSMUST00000196252 61 ntBASIC1.49□□□□□ -2.17
Msx1P13297 Mir448-201ENSMUST00000083516 112 ntBASIC1.49□□□□□ -2.17
Msx1P13297 Mir320-201ENSMUST00000083594 82 ntBASIC1.49□□□□□ -2.17
Msx1P13297 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Msx1P13297 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.48□□□□□ -2.17
Msx1P13297 Gm24942-201ENSMUST00000158328 114 ntBASIC1.48□□□□□ -2.17
Msx1P13297 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Msx1P13297 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Msx1P13297 Gm26338-201ENSMUST00000102372 110 ntBASIC1.47□□□□□ -2.17
Msx1P13297 Gm24797-201ENSMUST00000178103 107 ntBASIC1.47□□□□□ -2.17
Msx1P13297 Gm27248-201ENSMUST00000184004 166 ntBASIC1.47□□□□□ -2.17
Msx1P13297 Mir7059-201ENSMUST00000184825 59 ntBASIC1.47□□□□□ -2.17
Msx1P13297 Gm25138-201ENSMUST00000083248 136 ntBASIC1.47□□□□□ -2.17
Msx1P13297 Gm25128-201ENSMUST00000083339 76 ntBASIC1.47□□□□□ -2.17
Msx1P13297 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.46□□□□□ -2.18
Msx1P13297 Mir6351-201ENSMUST00000183826 99 ntBASIC1.46□□□□□ -2.18
Msx1P13297 Mir7052-201ENSMUST00000184821 65 ntBASIC1.46□□□□□ -2.18
Msx1P13297 Mir200b-201ENSMUST00000083615 70 ntBASIC1.46□□□□□ -2.18
Msx1P13297 Gm24174-201ENSMUST00000158933 111 ntBASIC1.45□□□□□ -2.18
Msx1P13297 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.45□□□□□ -2.18
Msx1P13297 Gm26301-201ENSMUST00000104813 95 ntBASIC1.44□□□□□ -2.18
Msx1P13297 Gm22720-201ENSMUST00000122710 87 ntBASIC1.44□□□□□ -2.18
Msx1P13297 Gm23329-201ENSMUST00000157415 108 ntBASIC1.44□□□□□ -2.18
Msx1P13297 Gm22965-201ENSMUST00000157958 101 ntBASIC1.44□□□□□ -2.18
Msx1P13297 Gm25307-201ENSMUST00000158885 106 ntBASIC1.44□□□□□ -2.18
Msx1P13297 Gm22474-201ENSMUST00000179407 107 ntBASIC1.44□□□□□ -2.18
Msx1P13297 Gm24259-201ENSMUST00000083740 107 ntBASIC1.44□□□□□ -2.18
Msx1P13297 Gm22165-201ENSMUST00000158414 103 ntBASIC1.43□□□□□ -2.18
Msx1P13297 Mir15a-201ENSMUST00000175266 84 ntBASIC1.43□□□□□ -2.18
Msx1P13297 Gm24321-201ENSMUST00000175348 80 ntBASIC1.43□□□□□ -2.18
Msx1P13297 Gm25993-201ENSMUST00000175391 80 ntBASIC1.43□□□□□ -2.18
Msx1P13297 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.43□□□□□ -2.18
Msx1P13297 Gm45125-201ENSMUST00000206908 151 ntBASIC1.43□□□□□ -2.18
Msx1P13297 Gm25802-201ENSMUST00000082639 77 ntBASIC1.43□□□□□ -2.18
Msx1P13297 Gm25894-201ENSMUST00000083458 75 ntBASIC1.43□□□□□ -2.18
Msx1P13297 Mir343-201ENSMUST00000102360 75 ntBASIC1.42□□□□□ -2.18
Msx1P13297 Gm23122-201ENSMUST00000157645 103 ntBASIC1.42□□□□□ -2.18
Msx1P13297 Gm25087-201ENSMUST00000101992 78 ntBASIC1.41□□□□□ -2.18
Msx1P13297 Mir6394-201ENSMUST00000184738 99 ntBASIC1.41□□□□□ -2.18
Msx1P13297 Gm26467-201ENSMUST00000097257 78 ntBASIC1.41□□□□□ -2.18
Msx1P13297 Mir717-201ENSMUST00000102259 109 ntBASIC1.4□□□□□ -2.19
Msx1P13297 Gm27656-201ENSMUST00000185055 80 ntBASIC1.4□□□□□ -2.19
Msx1P13297 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.4□□□□□ -2.19
Msx1P13297 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Msx1P13297 Gm27587-201ENSMUST00000185116 163 ntBASIC1.39□□□□□ -2.19
Msx1P13297 Gm38274-201ENSMUST00000195689 148 ntBASIC1.39□□□□□ -2.19
Msx1P13297 Gm44962-201ENSMUST00000206460 279 ntBASIC1.39□□□□□ -2.19
Msx1P13297 Gm23558-201ENSMUST00000157823 80 ntBASIC1.38□□□□□ -2.19
Msx1P13297 Gm22542-201ENSMUST00000158166 95 ntBASIC1.38□□□□□ -2.19
Msx1P13297 Gm22016-201ENSMUST00000158793 114 ntBASIC1.38□□□□□ -2.19
Msx1P13297 Gm26007-201ENSMUST00000158798 120 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms