Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb1S4R1E0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb1S4R1E0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb1S4R1E0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb1S4R1E0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
H2afb1S4R1E0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1S4R1E0 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.32■□□□□ 0.04
H2afb1S4R1E0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1S4R1E0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Gm15039-201ENSMUST00000118914 875 ntBASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms