Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcb1Q9Z0H3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smarcb1Q9Z0H3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcb1Q9Z0H3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcb1Q9Z0H3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.52■□□□□ 0.39
Smarcb1Q9Z0H3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcb1Q9Z0H3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcb1Q9Z0H3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcb1Q9Z0H3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Mir3081-201ENSMUST00000175305 84 ntBASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smarcb1Q9Z0H3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcb1Q9Z0H3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Gm18421-201ENSMUST00000204122 625 ntBASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms