Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn11aQ9R053 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn11aQ9R053 Gm15372-201ENSMUST00000120729 834 ntBASIC20■□□□□ 0.79
Scn11aQ9R053 Gm11594-201ENSMUST00000122313 162 ntBASIC20■□□□□ 0.79
Scn11aQ9R053 Rprl3-201ENSMUST00000157400 290 ntBASIC20■□□□□ 0.79
Scn11aQ9R053 Gm2651-201ENSMUST00000203560 838 ntBASIC20■□□□□ 0.79
Scn11aQ9R053 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn11aQ9R053 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn11aQ9R053 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Scn11aQ9R053 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20■□□□□ 0.79
Scn11aQ9R053 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20■□□□□ 0.79
Scn11aQ9R053 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Scn11aQ9R053 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn11aQ9R053 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn11aQ9R053 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn11aQ9R053 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20■□□□□ 0.79
Scn11aQ9R053 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Scn11aQ9R053 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn11aQ9R053 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn11aQ9R053 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Scn11aQ9R053 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn11aQ9R053 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.98■□□□□ 0.79
Scn11aQ9R053 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.98■□□□□ 0.79
Scn11aQ9R053 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn11aQ9R053 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.98■□□□□ 0.79
Scn11aQ9R053 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.98■□□□□ 0.79
Scn11aQ9R053 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44357-201ENSMUST00000195897 142 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm19658-201ENSMUST00000196231 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44367-201ENSMUST00000196836 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44350-201ENSMUST00000197197 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44390-201ENSMUST00000197533 144 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44313-201ENSMUST00000198018 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44486-201ENSMUST00000198508 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44454-201ENSMUST00000198541 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44314-201ENSMUST00000199263 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44394-201ENSMUST00000199558 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44484-201ENSMUST00000199873 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44466-201ENSMUST00000200264 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Gm44359-201ENSMUST00000200671 138 ntBASIC19.97■□□□□ 0.79
Scn11aQ9R053 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn11aQ9R053 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scn11aQ9R053 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.96■□□□□ 0.79
Scn11aQ9R053 Gm11452-201ENSMUST00000122376 690 ntBASIC19.96■□□□□ 0.79
Scn11aQ9R053 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.96■□□□□ 0.79
Scn11aQ9R053 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Scn11aQ9R053 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.96■□□□□ 0.79
Scn11aQ9R053 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.95■□□□□ 0.78
Scn11aQ9R053 Gm12644-201ENSMUST00000119935 606 ntBASIC19.95■□□□□ 0.78
Scn11aQ9R053 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn11aQ9R053 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn11aQ9R053 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scn11aQ9R053 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.95■□□□□ 0.78
Scn11aQ9R053 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn11aQ9R053 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms