Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx5Q9JL61 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx5Q9JL61 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx5Q9JL61 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx5Q9JL61 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx5Q9JL61 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx5Q9JL61 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx5Q9JL61 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx5Q9JL61 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Gm23634-201ENSMUST00000175071 91 ntBASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Gm44450-201ENSMUST00000199528 114 ntBASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx5Q9JL61 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.82■□□□□ 0.44
Rfx5Q9JL61 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx5Q9JL61 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Gm11336-201ENSMUST00000118168 334 ntBASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Gm37722-201ENSMUST00000193757 208 ntBASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Gm18115-201ENSMUST00000221209 621 ntBASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms