Protein–RNA interactions for Protein: Q9JIM3

Ercc6l2, DNA excision repair protein ERCC-6-like 2, mousemouse

Predictions only

Length 1,537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc6l2Q9JIM3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 H2-Pa-201ENSMUST00000182803 626 ntBASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC24.04■■□□□ 1.44
Ercc6l2Q9JIM3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC24.03■■□□□ 1.44
Ercc6l2Q9JIM3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc6l2Q9JIM3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Fst-202ENSMUST00000223640 2612 ntBASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Gm44945-201ENSMUST00000206764 1187 ntBASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC24.01■■□□□ 1.43
Ercc6l2Q9JIM3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Gm15222-202ENSMUST00000228667 1726 ntBASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Gm18421-201ENSMUST00000204122 625 ntBASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc6l2Q9JIM3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc6l2Q9JIM3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 Gm37584-201ENSMUST00000193595 1290 ntBASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ercc6l2Q9JIM3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms