Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf13bQ9ET35 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf13bQ9ET35 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Gm4968-201ENSMUST00000071458 858 ntBASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf13bQ9ET35 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf13bQ9ET35 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf13bQ9ET35 Gm5408-201ENSMUST00000197998 747 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms