Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ripk4Q9ERK0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Ripk4Q9ERK0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Idnk-204ENSMUST00000226010 1898 ntBASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ripk4Q9ERK0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Gm17808-201ENSMUST00000200859 894 ntBASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ripk4Q9ERK0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ripk4Q9ERK0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ripk4Q9ERK0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Gm18958-201ENSMUST00000174258 762 ntBASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms