Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps35Q9EQH3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps35Q9EQH3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.91■□□□□ 0.3
Vps35Q9EQH3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps35Q9EQH3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Gm6433-201ENSMUST00000118634 875 ntBASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps35Q9EQH3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps35Q9EQH3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Vps35Q9EQH3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vps35Q9EQH3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms