Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc7Q9D541 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Gm7791-201ENSMUST00000219066 539 ntBASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc7Q9D541 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc7Q9D541 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc7Q9D541 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.77■□□□□ 0.75
Ccdc7Q9D541 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc7Q9D541 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc7Q9D541 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Timm23-208ENSMUST00000226683 750 ntBASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc7Q9D541 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Gm29257-201ENSMUST00000186115 639 ntBASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.74■□□□□ 0.75
Ccdc7Q9D541 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc7Q9D541 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Gm13168-201ENSMUST00000121771 632 ntBASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Odf3b-204ENSMUST00000227834 930 ntBASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms