Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 Chchd1-203ENSMUST00000224633 557 ntBASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Taf1dQ9D4V4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1dQ9D4V4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1dQ9D4V4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1dQ9D4V4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Taf1dQ9D4V4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Mir3113-201ENSMUST00000175478 76 ntBASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Taf1dQ9D4V4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Gm11780-201ENSMUST00000136880 516 ntBASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1dQ9D4V4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms