Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm18421-201ENSMUST00000204122 625 ntBASIC20.84■□□□□ 0.93
Trim34aQ99PP6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.84■□□□□ 0.93
Trim34aQ99PP6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34aQ99PP6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34aQ99PP6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34aQ99PP6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Trim34aQ99PP6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34aQ99PP6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34aQ99PP6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34aQ99PP6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Trim34aQ99PP6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34aQ99PP6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34aQ99PP6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34aQ99PP6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34aQ99PP6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34aQ99PP6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim34aQ99PP6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trim34aQ99PP6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Gm13884-201ENSMUST00000118103 829 ntBASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Gm15372-201ENSMUST00000120729 834 ntBASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim34aQ99PP6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim34aQ99PP6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim34aQ99PP6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34aQ99PP6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34aQ99PP6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim34aQ99PP6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim34aQ99PP6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34aQ99PP6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim34aQ99PP6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms