Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Phf7-203ENSMUST00000226565 1971 ntBASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpgs1Q99MS8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpgs1Q99MS8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Gm44450-201ENSMUST00000199528 114 ntBASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tpgs1Q99MS8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tpgs1Q99MS8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tpgs1Q99MS8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tpgs1Q99MS8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Gm11336-201ENSMUST00000118168 334 ntBASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tpgs1Q99MS8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tpgs1Q99MS8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tpgs1Q99MS8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms