Protein–RNA interactions for Protein: Q99KJ0

Ubxn2a, UBX domain-containing protein 2A, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubxn2aQ99KJ0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Gm26308-201ENSMUST00000157768 69 ntBASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Gm9727-201ENSMUST00000161387 555 ntBASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Gm4535-201ENSMUST00000182274 558 ntBASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Gm10355-201ENSMUST00000097146 517 ntBASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Fst-202ENSMUST00000223640 2612 ntBASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubxn2aQ99KJ0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.65■□□□□ 0.74
Ubxn2aQ99KJ0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ubxn2aQ99KJ0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ubxn2aQ99KJ0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Gm25745-201ENSMUST00000174945 133 ntBASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ubxn2aQ99KJ0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Gm44430-201ENSMUST00000203376 995 ntBASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ubxn2aQ99KJ0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 AV026068-213ENSMUST00000223675 1171 ntBASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubxn2aQ99KJ0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubxn2aQ99KJ0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubxn2aQ99KJ0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubxn2aQ99KJ0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubxn2aQ99KJ0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubxn2aQ99KJ0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms