Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Gm10602-201ENSMUST00000098239 609 ntBASIC17.06■□□□□ 0.32
Cdk9Q99J95 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk9Q99J95 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Cdk9Q99J95 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.05■□□□□ 0.32
Cdk9Q99J95 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.05■□□□□ 0.32
Cdk9Q99J95 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Cdk9Q99J95 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.04■□□□□ 0.32
Cdk9Q99J95 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.04■□□□□ 0.32
Cdk9Q99J95 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk9Q99J95 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk9Q99J95 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.03■□□□□ 0.32
Cdk9Q99J95 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.02■□□□□ 0.32
Cdk9Q99J95 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk9Q99J95 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cdk9Q99J95 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdk9Q99J95 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdk9Q99J95 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdk9Q99J95 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdk9Q99J95 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.01■□□□□ 0.31
Cdk9Q99J95 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms