Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha3Q91Y16 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Gm9987-201ENSMUST00000069768 567 ntBASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha3Q91Y16 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Gm7889-201ENSMUST00000185591 958 ntBASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Gm7791-201ENSMUST00000219066 539 ntBASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.66■□□□□ 0.42
Pcdha3Q91Y16 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Gm18959-201ENSMUST00000208954 655 ntBASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha3Q91Y16 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdha3Q91Y16 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Pcdha3Q91Y16 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdha3Q91Y16 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdha3Q91Y16 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdha3Q91Y16 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms