Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.58■□□□□ 0.4
Pcdhb1Q91Y08 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Gm5417-201ENSMUST00000079706 384 ntBASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb1Q91Y08 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb1Q91Y08 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb1Q91Y08 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Gm37055-201ENSMUST00000191866 133 ntBASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb1Q91Y08 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms