Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Gm22240-201ENSMUST00000175225 82 ntBASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Gm9731-201ENSMUST00000209480 747 ntBASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb4Q91XX6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb4Q91XX6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhgb4Q91XX6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Gm13216-201ENSMUST00000117145 591 ntBASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Timm23-208ENSMUST00000226683 750 ntBASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms