Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgc3Q91XX1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Gm10849-201ENSMUST00000100397 618 ntBASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Gm6420-201ENSMUST00000193885 723 ntBASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgc3Q91XX1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Gm27405-201ENSMUST00000184201 112 ntBASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhgc3Q91XX1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Gm13401-201ENSMUST00000117074 291 ntBASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhgc3Q91XX1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Gm7290-201ENSMUST00000104990 617 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Gm12918-201ENSMUST00000120234 636 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Gm15710-201ENSMUST00000121821 636 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Nespas-201ENSMUST00000143738 1083 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Gm5075-201ENSMUST00000196916 622 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms