Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb11Q91UZ8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb11Q91UZ8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Gm2274-201ENSMUST00000184539 609 ntBASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb11Q91UZ8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb11Q91UZ8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Gm6433-201ENSMUST00000118634 875 ntBASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb11Q91UZ8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.3■□□□□ 0.36
Pcdhb11Q91UZ8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb11Q91UZ8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb11Q91UZ8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb11Q91UZ8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb11Q91UZ8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb11Q91UZ8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.28■□□□□ 0.36
Pcdhb11Q91UZ8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms