Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.19■□□□□ 0.82
StrcQ8VIM6 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.19■□□□□ 0.82
StrcQ8VIM6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrcQ8VIM6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
StrcQ8VIM6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.17■□□□□ 0.82
StrcQ8VIM6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
StrcQ8VIM6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.16■□□□□ 0.82
StrcQ8VIM6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.16■□□□□ 0.82
StrcQ8VIM6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.16■□□□□ 0.82
StrcQ8VIM6 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.16■□□□□ 0.82
StrcQ8VIM6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.15■□□□□ 0.82
StrcQ8VIM6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.15■□□□□ 0.82
StrcQ8VIM6 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.15■□□□□ 0.82
StrcQ8VIM6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
StrcQ8VIM6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
StrcQ8VIM6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
StrcQ8VIM6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
StrcQ8VIM6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
StrcQ8VIM6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
StrcQ8VIM6 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.14■□□□□ 0.81
StrcQ8VIM6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
StrcQ8VIM6 Gm5682-201ENSMUST00000173402 505 ntBASIC20.13■□□□□ 0.81
StrcQ8VIM6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
StrcQ8VIM6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms