Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Gm12085-201ENSMUST00000119263 940 ntBASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Gm8520-201ENSMUST00000186517 868 ntBASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H1fooQ8VIK3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Mir1199-201ENSMUST00000117015 119 ntBASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H1fooQ8VIK3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Gm17661-201ENSMUST00000170317 270 ntBASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H1fooQ8VIK3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
H1fooQ8VIK3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H1fooQ8VIK3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H1fooQ8VIK3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H1fooQ8VIK3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.13□□□□□ -0.15
H1fooQ8VIK3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H1fooQ8VIK3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H1fooQ8VIK3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
H1fooQ8VIK3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms