Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Gm10138-203ENSMUST00000206952 366 ntBASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps4aQ8VEJ9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.41■□□□□ 0.22
Vps4aQ8VEJ9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4aQ8VEJ9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vps4aQ8VEJ9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.39■□□□□ 0.22
Vps4aQ8VEJ9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4aQ8VEJ9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4aQ8VEJ9 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps4aQ8VEJ9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms