Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Top1mtQ8R4U6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Gm30025-201ENSMUST00000218555 728 ntBASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top1mtQ8R4U6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Top1mtQ8R4U6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top1mtQ8R4U6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.19■□□□□ 0.82
Top1mtQ8R4U6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Gm13216-201ENSMUST00000117145 591 ntBASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top1mtQ8R4U6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms