Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxe1Q8R2I0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Foxe1Q8R2I0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Gm14494-201ENSMUST00000118786 435 ntBASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Gm14822-201ENSMUST00000122247 291 ntBASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Phf7-203ENSMUST00000226565 1971 ntBASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxe1Q8R2I0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.44■□□□□ 0.38
Foxe1Q8R2I0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.43■□□□□ 0.38
Foxe1Q8R2I0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Gm29707-201ENSMUST00000196325 491 ntBASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxe1Q8R2I0 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.41■□□□□ 0.38
Foxe1Q8R2I0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms