Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp7Q8R1T1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Gm18421-201ENSMUST00000204122 625 ntBASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp7Q8R1T1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
Chmp7Q8R1T1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Mir8098-201ENSMUST00000184011 137 ntBASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Gm5864-201ENSMUST00000202263 970 ntBASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp7Q8R1T1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp7Q8R1T1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Chmp7Q8R1T1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Chmp7Q8R1T1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp7Q8R1T1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Chmp7Q8R1T1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp7Q8R1T1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Gm13884-201ENSMUST00000118103 829 ntBASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms