Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cchcr1Q8K2I2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Gm38027-201ENSMUST00000192315 235 ntBASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cchcr1Q8K2I2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Gm12085-201ENSMUST00000119263 940 ntBASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Il3ra-202ENSMUST00000223589 738 ntBASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cchcr1Q8K2I2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Gm7638-201ENSMUST00000121348 967 ntBASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.96■□□□□ 0.79
Cchcr1Q8K2I2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.95■□□□□ 0.79
Cchcr1Q8K2I2 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cchcr1Q8K2I2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Gm13168-201ENSMUST00000121771 632 ntBASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cchcr1Q8K2I2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms