Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rbm28Q8CGC6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Gm7284-201ENSMUST00000131667 944 ntBASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbm28Q8CGC6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rbm28Q8CGC6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Gm11355-201ENSMUST00000121120 306 ntBASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Gm26039-201ENSMUST00000158152 144 ntBASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbm28Q8CGC6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gm18958-201ENSMUST00000174258 762 ntBASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gm29518-201ENSMUST00000190858 372 ntBASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Gm10566-201ENSMUST00000086739 996 ntBASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbm28Q8CGC6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms