Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Il3ra-202ENSMUST00000223589 738 ntBASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc38Q8CDN8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc38Q8CDN8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Gm27000-201ENSMUST00000182943 842 ntBASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Gm8520-201ENSMUST00000186517 868 ntBASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc38Q8CDN8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc38Q8CDN8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms