Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm24841-201ENSMUST00000158676 357 ntBASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcpip1Q8CDG3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcpip1Q8CDG3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Vcpip1Q8CDG3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vcpip1Q8CDG3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vcpip1Q8CDG3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcpip1Q8CDG3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcpip1Q8CDG3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms