Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Gm13216-201ENSMUST00000117145 591 ntBASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps9d1Q8C190 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Gm11643-201ENSMUST00000119578 864 ntBASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Gm27275-201ENSMUST00000184318 272 ntBASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps9d1Q8C190 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps9d1Q8C190 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps9d1Q8C190 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps9d1Q8C190 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps9d1Q8C190 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Mir6349-201ENSMUST00000184059 97 ntBASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Dio3-201ENSMUST00000097228 1449 ntBASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps9d1Q8C190 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Gm6576-201ENSMUST00000169678 883 ntBASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps9d1Q8C190 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms