Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trub1Q8C0D0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trub1Q8C0D0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trub1Q8C0D0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trub1Q8C0D0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trub1Q8C0D0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Gm30025-201ENSMUST00000218555 728 ntBASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trub1Q8C0D0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Haglr-201ENSMUST00000100000 2085 ntBASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trub1Q8C0D0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms