Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Mir3081-201ENSMUST00000175305 84 ntBASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sh3rf2Q8BZT2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Gm17971-201ENSMUST00000190239 806 ntBASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3rf2Q8BZT2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf2Q8BZT2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3rf2Q8BZT2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Gm27357-201ENSMUST00000183754 135 ntBASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Gm18115-201ENSMUST00000221209 621 ntBASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms