Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Gm17661-201ENSMUST00000170317 270 ntBASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Gm9731-201ENSMUST00000209480 747 ntBASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Srrm4Q8BKA3 Dancr-204ENSMUST00000132389 2347 ntBASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Il3ra-202ENSMUST00000223589 738 ntBASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Srrm4Q8BKA3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Srrm4Q8BKA3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Gm7889-201ENSMUST00000185591 958 ntBASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Srrm4Q8BKA3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Srrm4Q8BKA3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms