Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Trmt13-210ENSMUST00000198454 880 ntBASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf38Q8BI21 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf38Q8BI21 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Rnf38Q8BI21 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf38Q8BI21 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Rnf38Q8BI21 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf38Q8BI21 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Rnf38Q8BI21 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf38Q8BI21 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Gm4974-201ENSMUST00000209974 875 ntBASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf38Q8BI21 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Gm10653-202ENSMUST00000139570 835 ntBASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Gm10517-202ENSMUST00000192970 758 ntBASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf38Q8BI21 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf38Q8BI21 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms