Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Gm7230-201ENSMUST00000173026 815 ntBASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Gm2756-201ENSMUST00000195851 400 ntBASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trnp1Q80ZI1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Gm25990-201ENSMUST00000102440 86 ntBASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trnp1Q80ZI1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trnp1Q80ZI1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trnp1Q80ZI1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Gm4535-201ENSMUST00000182274 558 ntBASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Gm10355-201ENSMUST00000097146 517 ntBASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trnp1Q80ZI1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms