Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.48■□□□□ 0.55
Ush1gQ80T11 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Ush1gQ80T11 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.47■□□□□ 0.55
Ush1gQ80T11 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ush1gQ80T11 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Gm37722-201ENSMUST00000193757 208 ntBASIC18.46■□□□□ 0.55
Ush1gQ80T11 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.46■□□□□ 0.55
Ush1gQ80T11 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ush1gQ80T11 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ush1gQ80T11 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Mir770-201ENSMUST00000103252 94 ntBASIC18.45■□□□□ 0.54
Ush1gQ80T11 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.45■□□□□ 0.54
Ush1gQ80T11 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ush1gQ80T11 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms