Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf38bQ80SY5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38bQ80SY5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Gm11355-201ENSMUST00000121120 306 ntBASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Gm27742-201ENSMUST00000184667 60 ntBASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38bQ80SY5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Gm7063-201ENSMUST00000186840 981 ntBASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38bQ80SY5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38bQ80SY5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Gm13884-201ENSMUST00000118103 829 ntBASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.59■□□□□ 0.41
Prpf38bQ80SY5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms