Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg5Q71M36 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.52■□□□□ 0.4
Cspg5Q71M36 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cspg5Q71M36 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cspg5Q71M36 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cspg5Q71M36 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cspg5Q71M36 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cspg5Q71M36 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.51■□□□□ 0.39
Cspg5Q71M36 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.51■□□□□ 0.39
Cspg5Q71M36 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg5Q71M36 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.5■□□□□ 0.39
Cspg5Q71M36 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Gm7153-201ENSMUST00000117092 455 ntBASIC17.5■□□□□ 0.39
Cspg5Q71M36 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.5■□□□□ 0.39
Cspg5Q71M36 Gm18669-201ENSMUST00000216049 778 ntBASIC17.5■□□□□ 0.39
Cspg5Q71M36 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.5■□□□□ 0.39
Cspg5Q71M36 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.49■□□□□ 0.39
Cspg5Q71M36 Gm9013-201ENSMUST00000132939 882 ntBASIC17.49■□□□□ 0.39
Cspg5Q71M36 Gm44771-201ENSMUST00000206975 626 ntBASIC17.49■□□□□ 0.39
Cspg5Q71M36 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cspg5Q71M36 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg5Q71M36 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg5Q71M36 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cspg5Q71M36 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.47■□□□□ 0.39
Cspg5Q71M36 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms