Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.43■□□□□ 0.86
Sned1Q70E20 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Sned1Q70E20 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.43■□□□□ 0.86
Sned1Q70E20 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.43■□□□□ 0.86
Sned1Q70E20 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sned1Q70E20 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Sned1Q70E20 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.43■□□□□ 0.86
Sned1Q70E20 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sned1Q70E20 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sned1Q70E20 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sned1Q70E20 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sned1Q70E20 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Sned1Q70E20 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.42■□□□□ 0.86
Sned1Q70E20 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sned1Q70E20 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sned1Q70E20 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Sned1Q70E20 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Sned1Q70E20 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.41■□□□□ 0.86
Sned1Q70E20 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.41■□□□□ 0.86
Sned1Q70E20 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sned1Q70E20 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.4■□□□□ 0.86
Sned1Q70E20 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Mir3113-201ENSMUST00000175478 76 ntBASIC20.4■□□□□ 0.86
Sned1Q70E20 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.4■□□□□ 0.86
Sned1Q70E20 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Sned1Q70E20 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sned1Q70E20 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sned1Q70E20 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sned1Q70E20 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sned1Q70E20 Gm7222-201ENSMUST00000117512 906 ntBASIC20.39■□□□□ 0.85
Sned1Q70E20 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.39■□□□□ 0.85
Sned1Q70E20 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.39■□□□□ 0.85
Sned1Q70E20 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Sned1Q70E20 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Sned1Q70E20 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.39■□□□□ 0.85
Sned1Q70E20 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sned1Q70E20 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Sned1Q70E20 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sned1Q70E20 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sned1Q70E20 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sned1Q70E20 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Sned1Q70E20 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.38■□□□□ 0.85
Sned1Q70E20 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sned1Q70E20 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sned1Q70E20 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.38■□□□□ 0.85
Sned1Q70E20 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sned1Q70E20 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.37■□□□□ 0.85
Sned1Q70E20 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.37■□□□□ 0.85
Sned1Q70E20 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.37■□□□□ 0.85
Sned1Q70E20 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sned1Q70E20 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.37■□□□□ 0.85
Sned1Q70E20 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sned1Q70E20 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Sned1Q70E20 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.36■□□□□ 0.85
Sned1Q70E20 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms