Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm23935-201ENSMUST00000102303 57 ntBASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Gm24270-201ENSMUST00000102326 57 ntBASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Gm24245-201ENSMUST00000157318 57 ntBASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Gm7506-201ENSMUST00000207758 815 ntBASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup188Q6ZQH8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.04■□□□□ 0.8
Nup188Q6ZQH8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Gm25745-201ENSMUST00000174945 133 ntBASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup188Q6ZQH8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup188Q6ZQH8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nup188Q6ZQH8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Nup188Q6ZQH8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Gm12497-201ENSMUST00000138778 237 ntBASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Gm6736-201ENSMUST00000166583 948 ntBASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup188Q6ZQH8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Gm7507-201ENSMUST00000183053 1008 ntBASIC20■□□□□ 0.79
Nup188Q6ZQH8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nup188Q6ZQH8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Gm8349-201ENSMUST00000182720 1003 ntBASIC20■□□□□ 0.79
Nup188Q6ZQH8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20■□□□□ 0.79
Nup188Q6ZQH8 Gm10576-201ENSMUST00000191927 825 ntBASIC20■□□□□ 0.79
Nup188Q6ZQH8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup188Q6ZQH8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms