Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Gm2213-201ENSMUST00000197485 688 ntBASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn10aQ6QIY3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Gm12260-201ENSMUST00000122447 411 ntBASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 AV026068-213ENSMUST00000223675 1171 ntBASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Gm25911-201ENSMUST00000157621 56 ntBASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn10aQ6QIY3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn10aQ6QIY3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scn10aQ6QIY3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scn10aQ6QIY3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn10aQ6QIY3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn10aQ6QIY3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Gm4459-201ENSMUST00000118750 468 ntBASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn10aQ6QIY3 Gm8097-201ENSMUST00000117903 829 ntBASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Gm9727-201ENSMUST00000161387 555 ntBASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Gm2756-201ENSMUST00000195851 400 ntBASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Scn10aQ6QIY3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gm6736-201ENSMUST00000166583 948 ntBASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 Gm6089-201ENSMUST00000197666 938 ntBASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.12■□□□□ 0.65
Scn10aQ6QIY3 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms