Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clca4aQ6Q473 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.18■□□□□ 0.66
Clca4aQ6Q473 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca4aQ6Q473 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clca4aQ6Q473 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.18■□□□□ 0.66
Clca4aQ6Q473 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.18■□□□□ 0.66
Clca4aQ6Q473 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clca4aQ6Q473 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Gm14859-201ENSMUST00000117752 357 ntBASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Ank2-226ENSMUST00000189368 339 ntBASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca4aQ6Q473 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.15■□□□□ 0.66
Clca4aQ6Q473 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca4aQ6Q473 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Gm18421-201ENSMUST00000204122 625 ntBASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca4aQ6Q473 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clca4aQ6Q473 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clca4aQ6Q473 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clca4aQ6Q473 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clca4aQ6Q473 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms