Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac4Q6NZM9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac4Q6NZM9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Hdac4Q6NZM9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hdac4Q6NZM9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac4Q6NZM9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac4Q6NZM9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac4Q6NZM9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms