Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sp140Q6NSQ5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Gm7791-201ENSMUST00000219066 539 ntBASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Gm10812-201ENSMUST00000099864 546 ntBASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp140Q6NSQ5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Gm3375-201ENSMUST00000203929 796 ntBASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Il3ra-202ENSMUST00000223589 738 ntBASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp140Q6NSQ5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp140Q6NSQ5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Mir5122-201ENSMUST00000175004 89 ntBASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp140Q6NSQ5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sp140Q6NSQ5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms