Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cep290Q6A078 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cep290Q6A078 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cep290Q6A078 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.27■□□□□ 0.35
Cep290Q6A078 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cep290Q6A078 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cep290Q6A078 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cep290Q6A078 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Cep290Q6A078 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cep290Q6A078 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Gm23547-201ENSMUST00000158210 271 ntBASIC17.26■□□□□ 0.35
Cep290Q6A078 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.26■□□□□ 0.35
Cep290Q6A078 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cep290Q6A078 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.25■□□□□ 0.35
Cep290Q6A078 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.25■□□□□ 0.35
Cep290Q6A078 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cep290Q6A078 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
Cep290Q6A078 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.25■□□□□ 0.35
Cep290Q6A078 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Cep290Q6A078 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Gm15590-201ENSMUST00000078419 552 ntBASIC17.25■□□□□ 0.35
Cep290Q6A078 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cep290Q6A078 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cep290Q6A078 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.24■□□□□ 0.35
Cep290Q6A078 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cep290Q6A078 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.24■□□□□ 0.35
Cep290Q6A078 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.24■□□□□ 0.35
Cep290Q6A078 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.24■□□□□ 0.35
Cep290Q6A078 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cep290Q6A078 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.24■□□□□ 0.35
Cep290Q6A078 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.24■□□□□ 0.35
Cep290Q6A078 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cep290Q6A078 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Cep290Q6A078 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.23■□□□□ 0.35
Cep290Q6A078 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.23■□□□□ 0.35
Cep290Q6A078 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.23■□□□□ 0.35
Cep290Q6A078 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.23■□□□□ 0.35
Cep290Q6A078 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cep290Q6A078 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.23■□□□□ 0.35
Cep290Q6A078 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cep290Q6A078 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.22■□□□□ 0.35
Cep290Q6A078 Gm18421-201ENSMUST00000204122 625 ntBASIC17.22■□□□□ 0.35
Cep290Q6A078 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cep290Q6A078 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cep290Q6A078 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms