Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptp4a1Q63739 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptp4a1Q63739 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptp4a1Q63739 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptp4a1Q63739 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptp4a1Q63739 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Ptp4a1Q63739 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptp4a1Q63739 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gm10517-202ENSMUST00000192970 758 ntBASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptp4a1Q63739 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.19■□□□□ 0.02
Ptp4a1Q63739 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Gm24841-201ENSMUST00000158676 357 ntBASIC15.19■□□□□ 0.02
Ptp4a1Q63739 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptp4a1Q63739 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ptp4a1Q63739 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptp4a1Q63739 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms